GENALICE’ team of accredited bioinformaticians has performed a benchmark study genome analysis for alignment and variant calling using GENALICE MAP software on NA12878 data from the Illumina Platinum Genomes project.
The report describes the data analysis approach, processing speed, storage footprint reduction and accuracy of the variant call sets, which we tested in-house before sharing the data. Moreover, GENALICE MAP’s performance is directly compared to three widely used third-party NGS workflows.
This genome analysis report covers:
- Materials and methods on sequence data, workflows and hardware configuration
- Results on accuracy, processing speed and storage footprint